Package: coenocliner 0.2-3
coenocliner: Coenocline Simulation
Simulate species occurrence and abundances (counts) along gradients.
Authors:
coenocliner_0.2-3.tar.gz
coenocliner_0.2-3.zip(r-4.5)coenocliner_0.2-3.zip(r-4.4)coenocliner_0.2-3.zip(r-4.3)
coenocliner_0.2-3.tgz(r-4.4-any)coenocliner_0.2-3.tgz(r-4.3-any)
coenocliner_0.2-3.tar.gz(r-4.5-noble)coenocliner_0.2-3.tar.gz(r-4.4-noble)
coenocliner_0.2-3.tgz(r-4.4-emscripten)coenocliner_0.2-3.tgz(r-4.3-emscripten)
coenocliner.pdf |coenocliner.html✨
coenocliner/json (API)
NEWS
| # Install 'coenocliner' in R: |
| install.packages('coenocliner', repos = c('https://gavinsimpson.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/gavinsimpson/coenocliner/issues
Last updated 4 years agofrom:a63f96a9c9. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Aug 22 2024 |
| R-4.5-win | OK | Aug 22 2024 |
| R-4.5-linux | OK | Aug 22 2024 |
| R-4.4-win | OK | Aug 22 2024 |
| R-4.4-mac | OK | Aug 22 2024 |
| R-4.3-win | OK | Aug 22 2024 |
| R-4.3-mac | OK | Aug 22 2024 |
Exports:BetacoenoclineexpandGaussianlocationsprettyHeadshowParamssimJamil
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Simulate species abundance (counts) or occurrence along one or two gradients | coenocline |
| A coenocline simulation package for R | coenocliner-package coenocliner |
| Wrappers to random number generators for use with coenocliner | Bernoulli BetaBinomial Binomial distributions NegBin Poisson ZIB ZIBB ZINB ZIP |
| An 'expand.grid'-like function that repeats sets of vectors for every value in a reference vector. | expand |
| Extract Gradient Locations | locations locations.default |
| Perspective Plot of Species Simulations Along Gradients | persp.coenocline |
| Plot species simulations along gradients | lines.coenocline plot.coenocline |
| List parameters of species response models | showParams |
| Simulate species abundance data following Jamil & ter Braak (2013) | simJamil |
| Species response models for coenocline simulation | Beta Gaussian species-response |
| Stack columns of a species coenocline simulation | stack.coenocline |
