Introduction | A brief overview of coenocliner | Future directions | Appendix
Package: coenocliner 0.2-3999
coenocliner: Coenocline Simulation
Simulate species occurrence and abundances (counts) along gradients.
Authors:
coenocliner_0.2-3999.tar.gz
coenocliner_0.2-3999.zip(r-4.7)coenocliner_0.2-3999.zip(r-4.6)coenocliner_0.2-3999.zip(r-4.5)
coenocliner_0.2-3999.tgz(r-4.6-any)coenocliner_0.2-3999.tgz(r-4.5-any)
coenocliner_0.2-3999.tar.gz(r-4.7-any)coenocliner_0.2-3999.tar.gz(r-4.6-any)
coenocliner_0.2-3999.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
coenocliner/json (API)
| # Install 'coenocliner' in R: |
| install.packages('coenocliner', repos = c('https://gavinsimpson.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/gavinsimpson/coenocliner/issues
Last updated from:68eeb45565. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 104 | ||
| source / vignettes | OK | 114 | ||
| linux-release-x86_64 | OK | 110 | ||
| macos-release-arm64 | OK | 75 | ||
| macos-oldrel-arm64 | OK | 79 | ||
| windows-devel | OK | 74 | ||
| windows-release | OK | 67 | ||
| windows-oldrel | OK | 66 | ||
| wasm-release | OK | 100 |
Exports:BetacoenoclineexpandGaussianlocationsprettyHeadshowParamssimJamil
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Simulate species abundance (counts) or occurrence along one or two gradients | coenocline |
| A coenocline simulation package for R | coenocliner-package coenocliner |
| Wrappers to random number generators for use with coenocliner | Bernoulli BetaBinomial Binomial distributions NegBin Poisson ZIB ZIBB ZINB ZIP |
| An 'expand.grid'-like function that repeats sets of vectors for every value in a reference vector. | expand |
| Extract Gradient Locations | locations locations.default |
| Perspective Plot of Species Simulations Along Gradients | persp.coenocline |
| Plot species simulations along gradients | lines.coenocline plot.coenocline |
| List parameters of species response models | showParams |
| Simulate species abundance data following Jamil & ter Braak (2013) | simJamil |
| Species response models for coenocline simulation | Beta Gaussian species-response |
| Stack columns of a species coenocline simulation | stack.coenocline |
